Back To School: Mac research tools
TUAW's going Back to School! We'll be bringing you tips and reviews for students, parents and teachers right up until the bell rings in September. Read on for high school & college-level help.
At any level of schooling, you eventually have to do a little research. There are probably those who caution against doing any of that research on the web, but if you're aware that faulty (and downright false) information exists and take the extra steps to ensure that what you're citing is verifiable, the net can be a treasure trove of information.
Hyperlinks and full-text search of a massive amount of information make the electronic frontier an ideal research tool. But you've heard all of that before, so read on as we look at some research tools specifically for Mac users (and we'll try to stay within a typical student's budget).
Scouring the Net
Finding the information you need is, obviously, the first step. If your learning institution has access to specialized information repositories, your job may be easier when it comes to citing sources and finding relevant articles. For the rest of us, sources such as Wikipedia and Google Scholar can, in most cases, be a great source of valid and verifiable information. The responsibility to verify sources and make sure the information collected has proper citations lies with the researcher.
You can, of course, do all of your online research in your favorite web browser. Some desktop tools, though, can provide faster and more intuitive means of navigating and collecting information.
Pathway
Pathway is a free tool for navigating and collecting information from Wikipedia. It creates "webs" of pages, allowing you to map your trail through the wiki's articles. You start with a search, and the search result creates the center node of the map. Satellite links are created from the table of contents for the page, and following any of them creates a new node, linked to the originating page and with its own satellite links.
Your path can be traced and retraced with great ease. Each page you view is shown in a separate pane, with a linked table of contents in a side drawer and the ability to add notes, grab images and even attach files to each article. Pages and page webs can be saved or exported for later reference.
Selenium
Selenium is an interesting tool. For $15US you get an all-in-one research tool. Much like the old TV/VCR combos, though, the all-in-one solution doesn't necessarily provide a top-quality solution for each of its included functions. Selenium combines a browser, a PDF manager (with annotation capabilities), an outliner, a Cocoa rich text editor, and bibliography manager. I wouldn't recommend it for writing a thesis, but for the average paper it can be a great way to bring all the necessary tools together in a single window (and for a reasonable price). I especially appreciate its ability to capture PDFs from web pages and annotate them. It also manages citations, and if you drag a quote from a web page in the integrated browser, it can automatically append a citation to your current document. Additionally, it interfaces fairly well with Google Docs, which provides document sharing and online storage possibilities. As a side note, I sometimes use Selenium for blogging, and have created a citation style for it which inserts Markdown links.
DevonAgent
DEVONagent will cost you a little more, but provides some very impressive tools for mining the web. It retails at $49.95US, but there's a 25% educational discount available by request. DEVONagent is a whiz at scouring general and specialized online sources, providing intelligent summaries with multiple methods of viewing and navigation. You can see ranked keywords from the search results and a map which shows how they relate. AppleScript and Growl integration, as well as a System Service and Dashboard widget, allow it to integrate with your entire system. It works especially well with DEVONthink, which is available as a bundle with DevonAgent (student discount applies).
There are obviously more tools available for navigating the online information jungle. If you have a favorite, I'd love to hear about it in the comments.
Citing Sources
Once you've found your information, you'll need to provide references. Citing sources is vital to any research paper at any level of education, and any software that can help collect and format online references as citations and bibliographies has the potential to be extremely helpful. The available options range from freeware to software which costs hundreds of dollars. Let's take a quick look at a few of the available applications.
Reference Tracker
Reference Tracker is in beta right now, and is free for the time being (Update: 1.0 hit today and Reference Tracker is available for $29.95US until September 30th). It stores all of the citations in your essay, paper or research project, allowing easy insertion of bibliographic information once the sources have been collected. It can automatically format the citations as Harvard or American Psychological Association (APA) references. With its built in publication search engine and ISBN lookup feature, it makes locating journal articles and books a cinch, automatically pulling the information necessary to cite your source. It can also reference the current page in Safari and Firefox with a single click (although I didn't get it working with Firefox 3, yet). It also provides a folder system which allows groups of references to be output separately, which is ideal for large, multi-chapter projects. Sticky notes can be appended to any citation.
Bookends
Bookends is a popular reference manager with a full set of features. Its extensible collection of citation formats can output your references in just about any accepted style. It also provides built in internet search tools and does a great job of organizing and searching your reference collection as it builds. It provides automatic downloads of the original sources as well as file attachment and annotation capabilities, making the job of building a bibliography that much easier. With the available academic discount, you can pick up Bookends for $69US. Sonny Software, authors of Bookends, also provide a standalone version of just the search features of Bookends for free. It's called Reference Miner and is available at their website.
BibDesk
If you're familiar with the TeX typesetting system, or willing to learn, then BibDesk is an excellent (free) tool for searching, collecting, organizing and outputting bibliographic references. It uses the BibTeX file format, and integrates well with LaTeX. If you do a lot of research writing and aren't familiar with TeX, have a look. BibDesk makes the process easy and can output a large number of formats. BibDesk covers a large chunk of the functionality found in the commercial reference managers, including online search, file attachments, automatic citation generation and more. It's also AppleScriptable.
CiteInPages
CiteInPages is a free set of AppleScripts which integrate BibDesk with Apple's Pages word processor. They replace BibDesk's working citations with numbered or author-date citations inline, and create an ordered bibliography which is appended to your Pages document. If you use BibDesk and Pages, it could be a real time-saver.
Zotero
It's not Mac-specific, but I have to mention Zotero, a Firefox plugin which collects links, files, editable web archives, annotations, notes and more in a taggable, sortable and searchable database. It can automatically pull citations from certain sources, and can output a wide variety of citation formats. You can add additional formats, or even create your own. For a Firefox plugin, it's extremely impressive.
There are plenty of applications, widgets and, yes, websites which are designed to make online research and reference as simple as possible. I've covered a few here, but I'd love to hear about any standouts in the field which I may be overlooking. Happy researching, and hopefully, with the right tools, you won't dread your next 10-page assignment quite as much. We'll be taking a look at some great writing tools to accompany the research tools soon!
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TUAW's going Back to School! We'll be bringing you tips and reviews for students, parents and teachers right up until the bell rings in...
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The combination of Scrivener, Bookends and Mellel is absolutely brilliant.
Mellel certainly deserves a mention, as it makes citation an absolute breeze. I got it in a Mac software bundle the year before starting school, and have been glad ever since.
I've found http://Easybib.com is great for making bibliographies and http://www.lii.org/ gives credible sources that actual librarians have indexed...Not just a google bot
Also if you have any group projects, or want to form an online study group http://GroupTable.com really helped my groups stay connected, organized and on track
You missed a few other opensource programs. Skim is very good for reading articles. Freemind is similar to your other mind mapping. I use these programs all of the time especially when given a project
August 14 2008 at 1:16 PM Report abuse Permalink rate up rate down ReplyI'm glad to see the other college prof above giving props to Wikipedia. The practice of banning it seems shortsighted to me and done by people who haven't looked to see what is actually out there.
Of course you don't want it to be the only place you go to for your research, but it can be a very useful starting point. And provide useful teaching/discussion points.
All the arguments about there being inaccurate, misleading, and/or oversimplified information in sources like Wikipedia are also true for traditional publications - _including_ refereed academic journals.
And general assumptions can provide you with useful points of argument in your papers.
Jaded academic getting off the soapbox now ... :-)
Wikipédia is also banned à my university (UCL, Belgium), and I think it's the only problem with it (Wiki, not the uni ;-). I'm gonna have a look at these softwares, thank you very much. This was a helpful post :-)
August 14 2008 at 2:18 AM Report abuse Permalink rate up rate down ReplyI'm the developer of Reference Tracker, mentioned in this article. Just commenting to say that Reference Tracker come out of Beta today and version 1.0 is available with a load of new features.
August 13 2008 at 11:10 PM Report abuse Permalink rate up rate down ReplyThanks Jim, I've updated the post to indicate this. Congrats on the release!
August 14 2008 at 12:17 AM Report abuse Permalink rate up rate down Reply
As a college prof I second the qualified praise of wikipedia as a "when you don't even know what you don't know" starting point. I'm very glad it is out there, so long as students begin with it and move on from there to more authenticated sources.
Also want to put in a plug for bookends as an extremely well supported piece of software. Jon, the designer, has in my experience always been readily available to help with troubleshooting and implementation.
I myself am looking at Zotero as an eventual across-the-board solution but would recommend waiting to make extensive use of it until they move their operation into the cloud, which is per their blog coming soon.
Many students might be interesting in the OSX program we are developing right now and which will be released in october.
Actually, after having been dissatisfied for years with all these combinations of Word + Endnote or else, we decided we would have to write one program to do it all. So we are writing a word processor which is built on a database instead of document files and thus seamlessly integrates quotes, references etc. in your text, without program switching, without copy and paste and all by keeping track of all uses of your quotes and references. We'll have the screenshots out in about a month...
http://www.writeflow.net
Citing Wikipedia is banned full stop at my university and im pretty sure it is in most other UK universities and others around the world. So thats definitely a no-no. The other apps seem interesting, Reference Tracker and BookEnds look like they could come in useful and maybe DEVONagent too.
August 13 2008 at 5:31 PM Report abuse Permalink rate up rate down ReplyPathway and wikipedia don't seem to like each other. Whenever I use the new page button in the toolbar, wikipedia gives me an error, and the search results contain html tags which the app should be able to parse out.
August 13 2008 at 5:19 PM Report abuse Permalink rate up rate down ReplyI haven't had any problem using the English version (en.wikipedia...). Are you using an internationalized version of Wikipedia?
August 13 2008 at 7:03 PM Report abuse Permalink rate up rate down ReplyHot Apps on TUAW
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